Category Archives: Plants & Fungi

plants & fungi

Seen This Week: Witch-Hazel, Whoosh and Brown Leaves

Witch hazel, Schenley Park, 15 Nov 2024 (photo by Kate St. John)

16 November 2024

This week I found witch-hazel (Hamamelis virginiana) blooming in Schenley Park and was startled by a whoosh of wings that passed right in front of me below eye level. I was so startled that I screamed even though I knew that …

The whoosh was an immature red-tailed hawk zipping by to catch a mouse near the wall. In stealth mode the hawk did not flap his wings but he flew pretty close to me. If I didn’t like birds I might have been freaked out. He caught the mouse and I took his picture when he settled down.

Immature red-tailed hawk that buzzed past me in Schenley Park, 15 Nov 2024 (photo by Kate St. John)

By now most oaks have lost their leaves so the predominant color in Schenley and Frick is brown. Brown on the ground and lots of bare trees.

Brown fallen leaves, Schenley Park, 15 Nov 2024 (photo by Kate St. John)

In Schenley Park you can easily see through the woods at ground level because the deer have eaten all the thickets.

In Frick Park I spotted an unusual patch of green, probably an alien plant, so I went down there to check it out.

A green patch in the distance at Frick Park. What is it? 12 Nov 2024 (photo by Kate St. John)

Sure enough, this is an alien — stinging nettle (Urtica dioica), native to Eurasia and Africa. Deer eat stinging nettle in spring and summer but are shunning it at this time of year.

A patch of stinging nettle in Frick Park, 12 Nov 2024 (photo by Kate St. John)

By now the only place to find brilliant reds is in the sky.

Sunrise in Pittsburgh, 10 Nov 2024 (photo by Kate St. John)

Liking Lichens at Homewood Cemetery

Foliose lichen at Homewood Cemetery, 3 Nov 2024 (photo by Kate St. John)

12 November 2024

Many of us go to Homewood Cemetery to see birds like this merlin in December 2020, but there are many other attractions and some of them are subtle. Did you know the cemetery is a good place to find lichens?

Merlin at Homewood Cemetery, December 2020 (photo by Michelle Kienholz)

Lichens are two organisms that operate as one, a symbiotic partnership of a fungus with a green or blue-green algae, sometimes all three.  The algae’s photosynthesis feeds the fungus.  The fungus gathers water and nutrients and protects the algae. This combination allows lichens to thrive in some of the harshest places the planet but they are sensitive to air pollution.  Those that grow on trees and tombstones are totally dependent on the surrounding air and precipitation for their nutrition.  Ultimately their tissues absorb elements in concentrations that mimic what’s in the air.

Since lichens are indicators of air quality, it was natural that GASP (the Group Against Smog Pollution) would hold a lichen walk at Homewood Cemetery on 2 November led by GASP’s Laura Kuster and cemetery historian Jennie Benford.

We didn’t have to walk far to find lichens.

Lauren Kuster points out the lichens on a tombstone, 2 Nov 2024 (photo by Jonathan Nadle)

They look like rumpled leaves stuck to the headstone. The leaves are reaching into the air.

Lichen at Homewood Cemetery, 2 Nov 2024 (photo by Jonathan Nadle)

The lichen’s shape gives an indication of local air quality.

  • Flat lichens (Crustose) have the least air exposure and can survive in relatively bad air.
  • Those that look like crumpled leaves (Foliose) can survive in medium air quality — not good but not bad air. We saw a lot of these at Homewood Cemetery.
  • Shaggy lichens that drip in open bunches (Fruticose) have the highest air exposure and need really good air quality to survive. We did not see any of these at Homewood Cemetery.
Types of lichens with examples from Laura Kuster, 2 Nov 2024 (photo by Jonathan Nadle)

Next time you’re at Homewood Cemetery check out the lichens. When you find the Howard Irish tombstone you’ve hit the jackpot!

Howard Irish tombstone at Homewood Cemetery is coated in lichens, 2 Nov 2024 (photo by Jonathan Nadle)

Seen This Week: Sun, Clouds, Acorns

Red oak acorns rained on us at Biddle’s, 4 Nov 2024 (photo by Kate St. John)

9 November 2024

It’s an abundant year for red oak acorns, also called a “big mast year.” The acorns pictured above rained on us while we sat outdoors at a coffee shop. Their parent tree shades the tables in summer but is not much fun this autumn.

In two days at Schenley Park: Sun through yellow trees on Tuesday. Overcast skies and russet oaks on Wednesday.

Sun through the trees at Schenley Park on Tuesday 5 Nov 2024 (photo by Kate St. John)
Overcast sky, russet oaks and leafless trees at Schenley Park on Wednesday 6 Nov 2024 (photo by Kate St. John)

I took a picture of a bird! An unusual, piebald pigeon.

Piebald pigeon from the side, 5 Nov 2024 (photo by Kate St. John)

The pattern extends to the back of its head.

Piebald pigeon from the back, 5 Nov 2024 (photo by Kate St. John)

In an August article, Grass Carpet in the Woods, I mentioned that “After Japanese stiltgrass goes to seed in early fall it dies and becomes a brown drape over the landscape in winter.” Well, here it is draping part of Frick Park near Wilford’s Pines.

Dead Japanese stiltgrass draping the landscape at Frick Park, 7 Nove 2024 (photo by Kate St. John)

Alien Plants Stand Out in November

Native maple (orange) and alien plants (green) along the trail at Hays Woods, 2 Nov 2024 (photo by Kate St. John)

7 November 2024

This brilliant orange maple stood out at Hays Woods last weekend but when I examined the photo I realized there’s a lesson in this picture.

The native trees are either bare or, like the maple, on their last hurrah. Meanwhile, there are leafy green plants in the understory whose seasonal cycles do not match Pittsburgh’s. The green ones are aliens.

Notice the difference in the slideshow below. Natives are outlined in white, aliens in pink. The easy-to-see aliens are bush honeysuckle and porcelainberry.

Alien plants often leaf out early and drop leaves late. As our climate warms up they have an advantage over cautious native plants whose seasonal cycles expect frost.

In the days ahead most native plants will lose their leaves(*) and the only green left will be the aliens.

Honeysuckle still green beneath bare trees at Hays Woods, 6 Nov 2022 (photo by Kate St. John)

In November, alien plants really stand out.

(*) p.s. Though oaks and beeches lose most of their leaves, they retain some leaves through the winter.

A Thornless Rose? There’s a Gene For It

Thorns (actually prickles) on a rose (photo from Wikimedia Commons)

21 October 2024

Thornless roses are the rose fancier’s dream but are difficult to breed, are usually infertile, and require a genetic mutation to block the prickles from emerging on the skin. Because the underlying trigger is still present, new growth on a “thornless” rose can produce prickles at the drop of a hat — injury, root suckers, etc.

What we call “thorns” on roses are technically prickles because they grow out of the skin. Roses, wineberry and devil’s walking stick have the same gene coding for prickles.

Wineberry prickles, Schenley Park, Nov 2019 (photo by Kate St. John)
Devil’s walking stick (or maybe Japanese angelica), Jan 2021 (photo by Kate St. John)

What are the genes underlying prickle development? Two studies published in August 2024 investigated Solanum prickle plants (eggplants, tomatoes) and found that they share the same LOG family genes. When scientists disrupted those genes it resulted in prickle loss in multiple species and did not adversely affect other parts of the plant.

Because roses have prickles and may share the same gene coding, there is new hope for creating a truly smooth stemmed rose.

See a summary of the studies in Smithsonian magazine. The two scientific studies are here and here.

p.s. Why are rose thorns actually prickles? Find out at Ohio State University: Armed by Nature: Thorns, Spines, and Prickles

Fungi Remember and They Have a Plan

Fruiting body of split gill mushroom, College Station, TX (photo from Wikimedia Commons)

20 October 2024

This week the Good News Network reported on a study published in ScienceDirect that shows fungi perceive shapes in the world around them, have memories, make decisions and solve problems. All without a brain!

A Japanese study of fungal networks set up an experiment with wood cubes pre-colonized with a wood decaying fungus, Phanerochaete velutina. The fruiting body and mycelia are shown below.

Fruiting bodies and mycelia of wood decay fungus, Phanerochaete velutina (photo by Gerald Holmes, Strawberry Center, Cal Poly San Luis Obispo, via Bugwood.org)

The scientists laid the cubes on a bed of clean soil in two patterns, a circle and an X, then observed and photographed what happened over a period of months.

  • By Day 13 the fungi had grown filaments (hypha) that made the cubes look fuzzy, particularly in the X shape. (hypha are collectively called mycelia)
  • By Day 34 some filaments from each cube had joined with the mycelia of neighboring cubes, but the rest of the hyphae were still seeking so the shapes were super fuzzy.
  • By Day 116, almost four months later, the “chatter” had subsided and the fuzzies were mostly gone in favor of strong, efficient networks.

Over time it became obvious that the fungi were not acting randomly. They remembered shapes and were making decisions.

If the fungi didn’t display decision-making skills, they would simply spread out from a central point without consideration for the position of the blocks.

For the X arrangement, the degree of mycelial colonization was greater in the outermost four blocks. It was hypothesized that this was because the outermost blocks can serve as “outposts” for the mycelial network to embark on foraging expeditions, therefore more dense connections were required compared to the five blocks inside the X.

In the circle arrangement, the degree of mycelial colonization was the same at any given block. However, all the empty space inside the circle remained clear. It was proposed that the mycelial network did not see a benefit in overextending itself in an already well-populated area.

Good News Network: Scientist Shows Fungi Are ‘Mind-blowing’: They Have Memories, Learn Shapes, Can Make Decisions and Solve Problems

In order to optimize their patterns the fungi must be communicating through the network. That’s where the beautiful split gill mushroom (Schizophyllum commune), shown at top, comes in.

Two years ago a study of electrical signals in the filaments (hypha) of enoki, split gill, ghost and caterpillar fungi discovered that their signals pulse when there’s something important to say such as “Found a new source of food.” Sometimes the pulses were similar to words and it appeared that the fungi knew 50 “words.”(*)

Read more about the “word” study at Good News Network: Research Suggests Mushrooms Talk to Each Other With a Vocabulary of 50 ‘Words’(*) See the source publication at Royal Society of Open Science: Language of fungi derived from their electrical spiking activity.

(*)NOTE: Some skepticism was reported at the end of the Good News Network “words” article:

Some scientists are skeptical that the research was done looking for ‘language’, suggesting that this puts a shroud of exaggeration and overexcitement about the findings.

To his credit, Adamatzky explained to the Guardian that it could be simply that the electrically-charged tips of hyphae were just creating electromagnetic reactions as they explore the forest underground.

Research Suggests Mushrooms Talk to Each Other With a Vocabulary of 50 ‘Words’

Seen This Week: Late Flowers, Acorns, Crows

Insect on New York aster, Toms Run, 16 Oct 2024 (photo by Kate St. John)

19 October 2024

This week brought:

  • Fall colors and the first piles of fallen leaves
  • Late flowers and insects
  • “See Your Breath” cold mornings
  • The first juncos … and …
  • Several thousand crows in Oakland.

In photos, late asters attracted an insect at Toms Run and morning sun slanted through the trees in Schenley Park.

Fall colors and fallen leaves, Schenley Park, 18 Oct 2024 (photo by Kate St. John)

Many trees are changing color. The oaks aren’t there yet but they have dropped their acorns leaving empty acorn cups on the branches. It’s a big mast year for red oaks in Pittsburgh.

Red oak leaves and acorn cups, 13 October 2024 (photo by Kate St. John)

A rhododendron in Shadyside is confused. Is it spring?

Confused rhododendron blooming in Pittsburgh, 13 Oct 2024 (photo by Kate St. John)

This week crows were absent from Oakland during the day but arrived in huge flocks at dusk, staging on rooftops before flying to the roost. I fumbled to photograph them on the RAND Building last Sunday. This is only a fraction of the flock that flew away.

Crows make a stop on the RAND building before sunset, 13 Oct 2024 (photo by Kate St. John)

Obviously they’ve been roosting on Pitt’s campus. I found evidence below trees at the Pitt Panther statue. The Crows Slept Here Last Night.

Evidence at Pitt that The Crows Slept Here Last Night, 17 October 2024 (photo by Kate St. John)

Mangroves Protecting The Coast

Great egret among mangroves in Gambia (photo from Wikimedia Commons)

18 October 2024

I have heard that mangroves protect coastlines during hurricanes and tsunamis but I could not imagine how they did it until I saw this video from Licypriya Kangujam (@LicypriyaK), Special Envoy for the President of the Republic of Timor-Leste and 13 year old climate activist.

Timor-Leste, also known as East Timor, is the eastern half of Timor island, located north of Australia. The other half of the island is part of Indonesia.

Map of Timor Leste from Wikimedia Commons

Timor was created by volcanoes so its mountains are steep and nearly everyone lives on the coast. It is good to live by the sea, but they need mangroves to protect them.

Scene from East Timor (photo from Wikimedia Commons)

Timor island is located in the region with the highest diversity of mangroves in the world — 26-47 species in one place. Compare this to just one or two species in Louisiana.

Map of mangrove species distribution worldwide (from ResearchGate: Oil Spills in Mangroves: Planning and Response)

When a hurricane hits Louisiana we often hear that the damage would not have been so great if they had more mangroves. Louisiana is now trying to restore their mangrove forest but it is slow going.

Learn more about mangroves in this award-winning video from The Marine Diaries.

video embedded from The Marine Diaries on YouTube

A Tomato That Thrives in Salty Soil

Currant Tomato (Solanum pimpinellifolium) at Pantanos de Villa, Chorrillos, Peru (photo by ruthgo via iNaturalist)

15 October 2024

Many crops around the world are irrigated but this inevitably leads to salty soil. Eventually the land becomes useless for agriculture.

Irrigation eventually makes the soil salty: Irrigation rig in Yuma County, AZ, 1987 (photo from Wikimedia Commons)

USDA explains:

What happens when you irrigate?
Irrigation inevitably leads to the salinization of soils and waters. In the United States yield reductions due to salinity occur on an estimated 30% of all irrigated land. World wide, crop production is limited by the effects of salinity on about 50% of the irrigated land area. … Concern is mounting about the sustainability of irrigated agriculture.

Where does all the salt come from?
Application of irrigation water results in the addition of soluble salts such as sodium, calcium, magnesium, potassium, sulfate, and chloride dissolved from geologic materials with which the waters have been in contact. Evaporation and transpiration (plant uptake) of irrigation water eventually cause excessive amounts of salts to accumulate in soils unless adequate leaching and drainage are provided.

USDA Agricultural Water Efficiency and Salinity Research Unit: Riverside, CA: Frequently Asked Questions About Salinity

Salt residue makes the soil hostile for everything, even weeds.

Salty residue after irrigation water percolated up and evaporated, 2011 (photo from Wikimedia Commons)

This worldwide problem will get only worse as climate change increases drought, so a team of researchers looked for salt tolerant crops.

Focusing on the tomato’s closest wild relative, the tiny currant tomato (Solanum pimpinellifolium), they selected “over 2,700 cultivars, raising the seedlings in two environments: a greenhouse, and an open field.”

The best results came from five cultivars from Peru.

Currant tomato flowers in Lambayeque, Peru(photo by jackychj via iNaturalist)
Currant Tomato (Solanum pimpinellifolium) at Los Pantanos de Villa near Lima, Peru

What genes do these plants have that make them thrive? That’s a question for the next study.

Read more in Anthropocene Magazine: A tiny tomato may harbor the secret to salt-tolerance in a climate-changed world. “The closest living wild relative of the common tomato holds untapped genetic secrets thanks to its large diversity.”

Seen This Week: a Mast Year and Tree Grafts

Sun rays through the mist, Schenley Park, 4 Oct 2024 (photo by Kate St. John)

12 October 2024

This week’s biggest Seen event was the aurora borealis which I wrote about yesterday (Northern Lights Last Night in Pittsburgh), but there were also subtle changes in the landscape that prompted a few photos.

Cold weather brought foggy mornings and sun rays burning through the mist in Schenley Park, at top.

It’s a big mast year for Schenley’s red oaks. These shallow, tightly scaled cups are the easiest way to identify red oak versus white oak.

Closeup of two red oak acorns with caps, 8 Oct 2024 (photo by Kate St. John)

It was hard to find two acorns that still had their cups. These two are intact because a worm drilled into the nuts. I searched through lots of cup-less acorns to find them.

Big mast year for red oaks in Schenley Park, 8 Oct 2024 (photo by Kate St. John)

For decades I’ve walked past these trees without thinking about their odd looking trunks. The trunks have hips because …

Grafted cherry trees, Schenley Park near Westinghouse Memorial, 8 October 2024 (photo by Kate St. John)

… these ornamental cherry trees were grafted onto healthy trunks of (probably) native trees. This is usually done because the non-native tree roots are likely to fail in North America.

Grafted cherry trunk, Schenley Park, 8 October 2024 (photo by Kate St. John)

Fall leaf color is not brilliant yet but burning bush berries are ready to entice birds. Euonymus alatus is a pretty plant but is officially a Noxious Weed in Pennsylvania since January 2023.

Euonymus fruit in garden bed, 2 Oct 2024 (photo by Kate St. John)